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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7286782 chr22:34290257 A/G POLR2F chr22:38348614-38437922:+ 0.44 5.94 5.42E-9 Box Plot
THCA rs7286782 chr22:34290257 A/G RBX1 chr22:41347351-41369313:+ 0.41 5.91 6.36E-9 Box Plot
THCA rs7286782 chr22:34290257 A/G RNF185 chr22:31556169-31603005:+ 0.58 5.97 4.67E-9 Box Plot
THCA rs7286782 chr22:34290257 A/G SMCR7L chr22:39896105-39914136:+ 0.53 6.42 3.35E-10 Box Plot
THCA rs7286782 chr22:34290257 A/G ST13 chr22:41220539-41253026:- 0.57 6.25 9.09E-10 Box Plot
THCA rs7286782 chr22:34290257 A/G TCF20 chr22:42556019-42739622:- 0.62 6.74 4.54E-11 Box Plot
THCA rs7286782 chr22:34290257 A/G TOMM22 chr22:39077953-39081426:+ 0.56 6.13 1.89E-9 Box Plot
THCA rs7286782 chr22:34290257 A/G TOP3B chr22:22311397-22337213:- 0.48 6.02 3.4E-9 Box Plot
THCA rs7286782 chr22:34290257 A/G TRMT2A chr22:20099389-20104915:- 0.49 5.95 5.1E-9 Box Plot
THCA rs7286782 chr22:34290257 A/G TUBGCP6 chr22:50656118-50683421:- 0.53 7.62 1.42E-13 Box Plot
THCA rs7286782 chr22:34290257 A/G TUG1 chr22:31366663-31375381:+ 0.54 6.04 3.14E-9 Box Plot
THCA rs7286782 chr22:34290257 A/G UBE2L3 chr22:21903736-21978323:+ 0.53 6.01 3.68E-9 Box Plot
THCA rs7286782 chr22:34290257 A/G ZNF70 chr22:24080865-24093279:- 0.58 6.22 1.06E-9 Box Plot
THCA rs7286782 chr22:34290257 A/G ZNF74 chr22:20748405-20762751:+ 0.71 6.71 5.36E-11 Box Plot
THCA rs72870389 chr2:154957952 T/C FNDC1 chr6:159590429-159693141:+ -0.46 -6.01 3.59E-9 Box Plot